Yes! From April 12th, 2023 we've updated our Woocommerce integration plugin and made this available. Please update to the latest version of the plugin so you can take advantage of this option!
This update allows you to use the integration plugin for your WooCommerce stores which are built using WordPress multi-site. This includes:
Multi-sites using sub-domains
Multi-sites using sub-directories
If you do not use WordPress multisite, this update should have no effect on your integration.